C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mitogen-activated protein kinase kinase 4 pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000602584 MAP2K4P1-002 ENSG00000269904 9606 - X:73524275-73563085 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartLiverMuscleOvaryTestisENST00000602584
Transcript ID Adrenal Brain Breast Colon Heart Liver Muscle Ovary Testis
ENST00000602584 0.046±0.00 0.023±0.00 0.004±0.00 0.012±0.00 0.017±0.00 0.038±0.00 0.008±0.00 0.022±0.00 0.008±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006S4 CIL_0006S4_0001 CGP X:73447254-73687102

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000046963 Map2k4-005 protein_coding Mus_musculus 0 2344
ENSMUST00000152096 Map2k4-003 protein_coding Mus_musculus 0 704
ENSMUST00000140301 Map2k4-001 nonsense_mediated_decay Mus_musculus 0 682
ENSMUST00000125598 Map2k4-007 protein_coding Mus_musculus 0 640
ENSDART00000130761 map2k4a-001 protein_coding Danio_rerio 0 538
ENSDART00000093037 map2k4a-003 protein_coding Danio_rerio 0 538
ENSDART00000058834 map2k4a-002 protein_coding Danio_rerio 0 486
ENSMUST00000140740 Map2k4-006 processed_transcript Mus_musculus 0 399
ENSMUST00000138093 Map2k4-004 processed_transcript Mus_musculus 0 383
ENSMUST00000130009 Map2k4-002 nonsense_mediated_decay Mus_musculus 2e-34 152

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