C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000602865 RP4-740C4.5-002 ENSG00000269896 9606 - 1:2350414-2352820 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000602865
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000602865 0.085±0.00 0.289±0.00 0.151±0.00 0.136±0.06 0.268±0.10 0.118±0.01 0.074±0.03 0.830±0.00 0.106±0.02 0.121±0.10 0.176±0.00 0.684±0.48 0.199±0.08 1.226±0.27

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007QV CIL_0007QV_0001 VISTA 1:1910870-2513425

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000098402 Snrpn-202 protein_coding Mus_musculus 0 263
ENSMUST00000059305 Snrpn-201 protein_coding Mus_musculus 0 263
ENSMUST00000189432 Snrpn-001 nonsense_mediated_decay Mus_musculus 2e-37 161
ENSMUST00000120366 Gm14881-001 processed_pseudogene Mus_musculus 7e-33 147

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