C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transcription elongation factor B (SIII), polypeptide 3 (110kDa, elongin A)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000609199 TCEB3-003 ENSG00000011007 9606 + 1:23743472-23759893 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000609199
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000609199 6.571±0.00 3.810±0.00 2.278±0.00 2.832±0.67 3.988±0.92 2.538±0.00 2.961±1.53 3.351±1.33 4.466±2.36 5.814±1.45 1.726±0.49 4.656±1.74 5.437±0.88 9.659±2.50

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002WC CIL_0002WC_0002 CGP 1:23743155-23788232

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030427 Tceb3-001 protein_coding Mus_musculus 0 2333

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