C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: potassium inwardly-rectifying channel, subfamily J, member 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000609713 KCNJ6-001 ENSG00000157542 9606 - 21:37607376-37916446 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000609713
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000609713 0.026±0.00 0.077±0.00 1.330±0.10 0.048±0.01 0.062±0.04 0.019±0.01 0.031±0.01 0.014±0.00 0.039±0.01 0.017±0.02 0.008±0.01 0.015±0.01 0.083±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006ZG CIL_0006ZG_0001 CGP 21:37365790-37916446
CIL_0008CJ CIL_0008CJ_0001 VISTA 21:37555304-38156921

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005242 TAS:IEA inward rectifier potassium channel activity
GO:0005515 IPI protein binding
GO:0005794 IDA Golgi apparatus
GO:0005886 IDA plasma membrane
GO:0006813 TAS:IEA potassium ion transport
GO:0007268 TAS synaptic transmission
GO:0008076 TAS voltage-gated potassium channel complex
GO:0015467 IEA G-protein activated inward rectifier potassium channel activity
GO:0016021 IEA integral component of membrane
GO:0034765 IEA regulation of ion transmembrane transport
GO:0071805 IEA potassium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000099508 Kcnj6-202 protein_coding Mus_musculus 0 1991
ENSMUST00000095873 Kcnj6-201 protein_coding Mus_musculus 0 1930
ENSMUST00000165538 Kcnj6-203 protein_coding Mus_musculus 0 1212

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