C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: T cell receptor beta variable 28
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000610416 TRBV28-201 ENSG00000211753 9606 + 7:142720670-142793255 TR_V_gene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000610416
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000610416 4.195±0.00 53.166±0.00 1.936±0.00 5.921±0.00 3.326±2.35 0.265±0.00 3.152±2.90 0.687±0.00 0.184±0.00 1.584±0.56 0.689±0.45 4.496±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005886 TAS plasma membrane
GO:0006955 NAS immune response
GO:0016020 NAS membrane
GO:0016021 IEA integral component of membrane
GO:0031295 TAS T cell costimulation
GO:0050776 TAS regulation of immune response
GO:0050852 TAS T cell receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000103291 Trbc1-201 IG_C_gene Mus_musculus 0 438
ENSMUST00000103299 Trbc2-201 IG_C_gene Mus_musculus 0 427

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