C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: T cell receptor beta, constant region 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000103291 Trbc1-201 ENSMUSG00000076490 10090 + 6:41538218-41539347 IG_C_gene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000103291
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000103291 1.488±0.84 0.636±0.34 0.091±0.07 44.858±19.37 3.277±0.56 0.674±0.41 2.375±1.86 0.677±0.37 4.036±0.90 0.151±0.02 0.739±0.49 0.420±0.20 0.086±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00039U CIL_00039U_0002 CGP 6:41521787-41620509

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000466254 TRBC2-001 TR_C_gene Homo_sapiens 0 414
ENST00000610416 TRBV28-201 TR_V_gene Homo_sapiens 0 438
ENST00000610439 TRBC1-201 protein_coding Homo_sapiens 0 379
ENST00000610566 TRBC2-201 TR_C_gene Homo_sapiens 0 414
ENST00000610847 TRBC2-202 TR_C_gene Homo_sapiens 0 414
ENST00000612107 TRBV25-1-201 TR_V_gene Homo_sapiens 0 438
ENST00000612153 TRBC1-202 protein_coding Homo_sapiens 0 409
ENST00000613594 TRBC1-203 protein_coding Homo_sapiens 0 433
ENST00000613720 TRBC1-204 protein_coding Homo_sapiens 0 409
ENST00000613761 TRBC2-203 TR_C_gene Homo_sapiens 0 414
ENST00000613903 TRBC1-205 protein_coding Homo_sapiens 0 433
ENST00000614992 TRBC1-206 protein_coding Homo_sapiens 0 409
ENST00000616837 TRBC2-204 TR_C_gene Homo_sapiens 0 414
ENST00000617717 TRBV25-1-202 TR_V_gene Homo_sapiens 0 438
ENST00000619125 TRBC1-207 protein_coding Homo_sapiens 0 379
ENST00000620987 TRBC1-208 protein_coding Homo_sapiens 0 409
ENST00000621068 TRBC1-209 protein_coding Homo_sapiens 0 409
ENST00000622053 TRBC1-210 protein_coding Homo_sapiens 0 409

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