C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: interferon, alpha 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000610521 IFNA5-001 ENSG00000147873 9606 - 9:21304326-21305312 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainColonOvaryTestisENST00000610521
Transcript ID Adrenal Brain Colon Ovary Testis
ENST00000610521 0.011±0.00 0.067±0.00 0.205±0.00 0.031±0.00 0.031±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00056K CIL_00056K_0008 CGP 9:21239002-21305312
CIL_00074D CIL_00074D_0001 CGP 9:21304326-21335380

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002250 IBA adaptive immune response
GO:0002286 IBA T cell activation involved in immune response
GO:0002323 IBA natural killer cell activation involved in immune response
GO:0005125 IBA cytokine activity
GO:0005126 TAS:IEA cytokine receptor binding
GO:0005132 IBA type I interferon receptor binding
GO:0005576 TAS:IEA extracellular region
GO:0005615 IBA extracellular space
GO:0006952 IEA defense response
GO:0006959 IBA humoral immune response
GO:0007596 TAS blood coagulation
GO:0019221 IBA cytokine-mediated signaling pathway
GO:0030183 IBA B cell differentiation
GO:0033141 IBA positive regulation of peptidyl-serine phosphorylation of STAT protein
GO:0042100 IBA B cell proliferation
GO:0043330 IBA response to exogenous dsRNA
GO:0045087 IBA innate immune response
GO:0045343 IBA regulation of MHC class I biosynthetic process
GO:0051607 IEA defense response to virus
GO:0060337 TAS type I interferon signaling pathway
GO:0060338 TAS regulation of type I interferon-mediated signaling pathway

Homologs

No Homologs available.

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