C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger, RAN-binding domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000610633 ZRANB2-201 ENSG00000132485 9606 - 1:71063292-71081029 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000610633
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000610633 3.104±0.00 3.990±0.00 7.165±1.35 3.731±0.21 6.700±0.25 1.310±0.00 4.013±1.62 2.146±0.77 6.758±1.79 2.044±0.00 5.633±2.50 2.892±0.23 8.610±2.05

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 TAS sequence-specific DNA binding transcription factor activity
GO:0003723 TAS RNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0006355 TAS regulation of transcription, DNA-templated
GO:0006397 IEA mRNA processing
GO:0008270 IEA zinc ion binding
GO:0008380 IEA RNA splicing
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000106063 Zranb2-202 protein_coding Mus_musculus 0 1733
ENSMUST00000106058 Zranb2-001 protein_coding Mus_musculus 0 1554
ENSMUST00000029831 Zranb2-201 protein_coding Mus_musculus 0 1410
ENSMUST00000184802 Zranb2-003 nonsense_mediated_decay Mus_musculus 0 1410
ENSMUST00000106057 Zranb2-002 protein_coding Mus_musculus 0 1134
ENSMUST00000152882 Zranb2-004 retained_intron Mus_musculus 0 839

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