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C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | tropomyosin 1 (alpha) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000610733  |
TPM1-034 |
ENSG00000140416 |
9606 | + |
15:63042687-63047726  |
protein_coding |
|
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Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_000502 | CIL_000502_0002 | CGP | 15:62390526-63071915 |
| CIL_00094O | CIL_00094O_0001 | VISTA | 15:62748846-63351985 |
| CIL_00098V | CIL_00098V_0001 | VISTA | 15:62790346-63394142 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000113697
|
Tpm1-006 | protein_coding | Mus_musculus | 0 | 520 |
|
ENSMUST00000113707
|
Tpm1-001 | protein_coding | Mus_musculus | 0 | 520 |
|
ENSMUST00000050905
|
Tpm1-004 | protein_coding | Mus_musculus | 0 | 508 |
|
ENSMUST00000030185
|
Tpm1-002 | protein_coding | Mus_musculus | 0 | 505 |
|
ENSMUST00000113685
|
Tpm1-003 | protein_coding | Mus_musculus | 0 | 436 |
|
ENSMUST00000131279
|
Tpm1-018 | processed_transcript | Mus_musculus | 0 | 429 |
|
ENSMUST00000129733
|
Tpm1-009 | nonsense_mediated_decay | Mus_musculus | 0 | 429 |
|
ENSMUST00000113693
|
Tpm1-011 | protein_coding | Mus_musculus | 0 | 425 |
|
ENSMUST00000113687
|
Tpm1-012 | protein_coding | Mus_musculus | 0 | 405 |
|
ENSMUST00000129466
|
Tpm1-019 | retained_intron | Mus_musculus | 0 | 364 |
|
ENSMUST00000113705
|
Tpm1-007 | protein_coding | Mus_musculus | 0 | 311 |
|
ENSMUST00000113701
|
Tpm1-010 | protein_coding | Mus_musculus | 0 | 226 |
|
ENSMUST00000034928
|
Tpm1-008 | protein_coding | Mus_musculus | 0 | 226 |
|
ENSMUST00000107913
|
Tpm2-201 | protein_coding | Mus_musculus | 8.96831e-44 | 183 |
|
ENSMUST00000150592
|
Tpm2-004 | protein_coding | Mus_musculus | 8.96831e-44 | 183 |
|
ENSMUST00000107914
|
Tpm2-001 | protein_coding | Mus_musculus | 8.96831e-44 | 183 |
|
ENSMUST00000030184
|
Tpm2-002 | protein_coding | Mus_musculus | 8.96831e-44 | 183 |
|
ENSMUST00000150262
|
Tpm2-003 | processed_transcript | Mus_musculus | 8.96831e-44 | 183 |
