C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mediator complex subunit 22
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000610888 MED22-006 ENSG00000148297 9606 - 9:133340905-133348117 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000610888
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000610888 4.784±0.00 8.437±0.00 0.515±0.00 2.319±1.36 5.414±0.00 3.549±2.02 1.936±0.00 4.254±3.36 1.518±0.22 4.394±3.11 0.980±0.00 7.588±6.82 7.075±4.38 3.672±2.40

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006DI CIL_0006DI_0001 CGP 9:133330716-133348131
CIL_0006DH CIL_0006DH_0001 CGP 9:133338323-133351426

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001104 IEA RNA polymerase II transcription cofactor activity
GO:0005515 IPI protein binding
GO:0005737 TAS cytoplasm
GO:0006357 IEA regulation of transcription from RNA polymerase II promoter
GO:0006366 IEA transcription from RNA polymerase II promoter
GO:0016592 IEA:IDA mediator complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102899 Med22-001 protein_coding Mus_musculus 0 582
ENSMUST00000015920 Med22-002 protein_coding Mus_musculus 0 553
ENSMUST00000139815 Med22-003 protein_coding Mus_musculus 0 311

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