C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mediator complex subunit 22
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000015920 Med22-002 ENSMUSG00000015776 10090 - 2:26905588-26910569 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverMuscleOvaryTestisENSMUST00000015920
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Muscle Ovary Testis
ENSMUST00000015920 11.842±2.76 26.504±19.75 6.841±0.57 5.755±0.82 7.615±0.66 6.072±0.96 4.409±0.47 6.317±0.99 9.650±2.41 9.545±1.71

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006DI CIL_0006DI_0002 CGP 2:26888628-26910677
CIL_0006DH CIL_0006DH_0002 CGP 2:26905262-26913318

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001104 IEA RNA polymerase II transcription cofactor activity
GO:0005515 IEA protein binding
GO:0005654 TAS nucleoplasm
GO:0006357 IEA regulation of transcription from RNA polymerase II promoter
GO:0006366 IEA transcription from RNA polymerase II promoter
GO:0016592 ISO mediator complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000343730 MED22-002 protein_coding Homo_sapiens 0 791
ENST00000371999 MED22-003 protein_coding Homo_sapiens 0 459
ENST00000446777 MED22-005 protein_coding Homo_sapiens 0 553
ENST00000457204 MED22-010 protein_coding Homo_sapiens 0 449
ENST00000482295 MED22-009 retained_intron Homo_sapiens 0 206
ENST00000494177 MED22-011 protein_coding Homo_sapiens 0 538
ENST00000610672 MED22-007 protein_coding Homo_sapiens 0 791
ENST00000610888 MED22-006 protein_coding Homo_sapiens 0 553
ENST00000614493 MED22-008 protein_coding Homo_sapiens 0 553

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