C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: guanine nucleotide binding protein (G protein), beta polypeptide 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000610897 GNB1-201 ENSG00000078369 9606 - 1:1785285-1891117 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000610897
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000610897 16.324±0.00 33.467±0.00 11.210±6.76 15.018±11.84 38.233±0.00 11.011±0.00 40.435±0.00 21.976±0.00 35.759±32.07 11.829±0.00 13.862±7.56 19.751±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001664 IEA G-protein coupled receptor binding
GO:0001750 IEA photoreceptor outer segment
GO:0001917 IEA photoreceptor inner segment
GO:0003924 IDA GTPase activity
GO:0004871 IEA signal transducer activity
GO:0005515 IPI:IEA protein binding
GO:0005622 ISS intracellular
GO:0005765 IDA lysosomal membrane
GO:0005834 IDA heterotrimeric G-protein complex
GO:0005886 TAS plasma membrane
GO:0006112 TAS energy reserve metabolic process
GO:0006184 IDA GTP catabolic process
GO:0007165 TAS signal transduction
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0007191 ISS adenylate cyclase-activating dopamine receptor signaling pathway
GO:0007200 IEA phospholipase C-activating G-protein coupled receptor signaling pathway
GO:0007204 IEA positive regulation of cytosolic calcium ion concentration
GO:0007213 TAS G-protein coupled acetylcholine receptor signaling pathway
GO:0007265 TAS Ras protein signal transduction
GO:0007268 TAS synaptic transmission
GO:0007596 TAS blood coagulation
GO:0007603 TAS phototransduction, visible light
GO:0008283 IEA cell proliferation
GO:0010659 IEA cardiac muscle cell apoptotic process
GO:0016020 ISS membrane
GO:0016056 TAS rhodopsin mediated signaling pathway
GO:0022400 TAS regulation of rhodopsin mediated signaling pathway
GO:0030168 TAS platelet activation
GO:0030425 IEA dendrite
GO:0030507 IEA spectrin binding
GO:0031702 IEA type 1 angiotensin receptor binding
GO:0031982 IDA vesicle
GO:0032403 IDA protein complex binding
GO:0042622 IEA photoreceptor outer segment membrane
GO:0044281 TAS small molecule metabolic process
GO:0044297 IEA cell body
GO:0050909 IEA sensory perception of taste
GO:0051020 IPI GTPase binding
GO:0060041 IEA retina development in camera-type eye
GO:0070062 IDA extracellular vesicular exosome
GO:0071377 TAS cellular response to glucagon stimulus
GO:0071380 ISS cellular response to prostaglandin E stimulus
GO:0071456 IEA cellular response to hypoxia
GO:0071870 ISS cellular response to catecholamine stimulus
GO:0097381 TAS photoreceptor disc membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030940 Gnb1-001 protein_coding Mus_musculus 0 1760
ENSMUST00000165335 Gnb1-201 protein_coding Mus_musculus 0 1759
ENSMUST00000105616 Gnb1-004 protein_coding Mus_musculus 0 1711
ENSMUST00000176637 Gnb1-008 protein_coding Mus_musculus 0 1646
ENSMUST00000177094 Gnb1-003 protein_coding Mus_musculus 0 1088
ENSMUST00000176308 Gnb1-007 retained_intron Mus_musculus 0 979
ENSDART00000130104 gnb1a-201 protein_coding Danio_rerio 0 965
ENSMUST00000175705 Gnb1-006 retained_intron Mus_musculus 0 861
ENSDART00000051231 gnb2-001 protein_coding Danio_rerio 0 739
ENSDART00000045015 gnb4b-201 protein_coding Danio_rerio 0 538
ENSDART00000019925 CABZ01087197.1-201 protein_coding Danio_rerio 0 375

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