C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: guanine nucleotide binding protein (G protein), beta 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000165335 Gnb1-201 ENSMUSG00000029064 10090 + 4:155491361-155559269 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonLiverMuscleOvaryPlacentaTestisENSMUST00000165335
Transcript ID Bladder Brain Colon Liver Muscle Ovary Placenta Testis
ENSMUST00000165335 25.342±2.25 28.896±8.73 42.884±17.31 11.362±3.80 1.814±0.00 27.970±9.89 28.984±14.32 12.203±6.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007QV CIL_0007QV_0002 VISTA 4:154934679-155536167

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001664 IEA G-protein coupled receptor binding
GO:0001750 IDA photoreceptor outer segment
GO:0001917 IEA photoreceptor inner segment
GO:0003924 ISA GTPase activity
GO:0004871 IEA signal transducer activity
GO:0005765 IEA lysosomal membrane
GO:0005834 IPI heterotrimeric G-protein complex
GO:0005886 TAS plasma membrane
GO:0006184 IEA GTP catabolic process
GO:0007186 IDA G-protein coupled receptor signaling pathway
GO:0007200 IDA phospholipase C-activating G-protein coupled receptor signaling pathway
GO:0007204 IEA positive regulation of cytosolic calcium ion concentration
GO:0007603 ISA phototransduction, visible light
GO:0008283 IDA cell proliferation
GO:0010659 ISO cardiac muscle cell apoptotic process
GO:0030425 IEA dendrite
GO:0030507 ISO spectrin binding
GO:0031702 IEA type 1 angiotensin receptor binding
GO:0031982 IEA vesicle
GO:0032403 ISO protein complex binding
GO:0042622 IEA photoreceptor outer segment membrane
GO:0044297 IEA cell body
GO:0050909 IDA sensory perception of taste
GO:0051020 IEA GTPase binding
GO:0060041 IMP retina development in camera-type eye
GO:0070062 IEA extracellular vesicular exosome
GO:0071456 ISO cellular response to hypoxia

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000051231 gnb2-001 protein_coding Danio_rerio 0 656
ENST00000232564 GNB4-001 protein_coding Homo_sapiens 0 588
ENST00000378609 GNB1-001 protein_coding Homo_sapiens 0 1711
ENST00000461893 GNB1-003 retained_intron Homo_sapiens 0 675
ENST00000466899 GNB4-004 protein_coding Homo_sapiens 2e-20 104
ENST00000468623 GNB4-003 protein_coding Homo_sapiens 0 588
ENST00000471354 GNB1-002 retained_intron Homo_sapiens 0 1086
ENST00000610897 GNB1-201 protein_coding Homo_sapiens 0 1759
ENST00000615252 GNB1-202 protein_coding Homo_sapiens 0 1417

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