C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein 145
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000611185 RNF145-201 ENSG00000145860 9606 - 5:159157413-159209598 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000611185
Transcript ID Adipose Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000611185 7.347±0.00 4.984±2.89 6.756±0.00 4.277±0.00 7.025±0.00 2.493±0.00 3.826±0.00 7.645±3.36 11.217±3.38 5.498±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007UN CIL_0007UN_0001 VISTA 5:158613954-159215603
CIL_00087L CIL_00087L_0001 VISTA 5:158759112-159360490
CIL_0008X2 CIL_0008X2_0001 VISTA 5:158781834-159383129
CIL_0008O4 CIL_0008O4_0001 VISTA 5:158790777-159391906

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0008270 IEA zinc ion binding
GO:0016021 IEA integral component of membrane
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000019333 Rnf145-006 protein_coding Mus_musculus 0 3099
ENSMUST00000101327 Rnf145-001 protein_coding Mus_musculus 0 924
ENSMUST00000124959 Rnf145-003 processed_transcript Mus_musculus 0 667

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