C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger, RAN-binding domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000611683 ZRANB2-202 ENSG00000132485 9606 - 1:71065719-71081289 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000611683
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000611683 5.317±0.00 9.107±0.00 8.848±0.41 6.181±0.51 6.665±0.00 5.065±0.00 6.969±0.00 4.406±0.00 11.149±0.00 2.255±0.00 9.769±1.92 13.912±0.00 24.969±10.85

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 TAS sequence-specific DNA binding transcription factor activity
GO:0003723 TAS RNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0006355 TAS regulation of transcription, DNA-templated
GO:0006397 IEA mRNA processing
GO:0008270 IEA zinc ion binding
GO:0008380 IEA RNA splicing
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000106063 Zranb2-202 protein_coding Mus_musculus 0 1321
ENSMUST00000106057 Zranb2-002 protein_coding Mus_musculus 0 1197
ENSMUST00000106058 Zranb2-001 protein_coding Mus_musculus 0 1140
ENSMUST00000029831 Zranb2-201 protein_coding Mus_musculus 0 998
ENSMUST00000184802 Zranb2-003 nonsense_mediated_decay Mus_musculus 0 998
ENSMUST00000152882 Zranb2-004 retained_intron Mus_musculus 0 839

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