C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: MGAT4 family, member C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000611864 MGAT4C-001 ENSG00000182050 9606 - 12:85955666-86049723 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000611864
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000611864 0.005±0.00 0.035±0.00 0.009±0.00 0.154±0.00 0.018±0.00 0.044±0.01 0.084±0.01 0.024±0.00 0.012±0.00 0.014±0.00 0.004±0.00 0.018±0.01 0.014±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000214 CIL_000214_0002 CGP 12:85874295-86838904

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0005975 IEA carbohydrate metabolic process
GO:0008454 IEA alpha-1,3-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016758 IEA transferase activity, transferring hexosyl groups
GO:0018279 TAS protein N-linked glycosylation via asparagine
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000179929 Mgat4c-202 protein_coding Mus_musculus 0 2001
ENSMUST00000163753 Mgat4c-201 protein_coding Mus_musculus 0 2001
ENSMUST00000020039 Mgat4c-001 protein_coding Mus_musculus 0 2001
ENSMUST00000120748 Mgat4c-002 protein_coding Mus_musculus 0 1999
ENSMUST00000138522 Mgat4c-008 protein_coding Mus_musculus 0 560
ENSMUST00000156751 Mgat4c-004 protein_coding Mus_musculus 0 309
ENSMUST00000127504 Mgat4c-006 protein_coding Mus_musculus 0 226

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