C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transcription elongation factor B (SIII), polypeptide 3 (110kDa, elongin A)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000613537 TCEB3-201 ENSG00000011007 9606 + 1:23743366-23762040 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000613537
Transcript ID Adipose Adrenal Brain Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000613537 5.264±0.00 3.071±0.00 1.734±0.00 3.739±0.00 3.582±0.00 3.498±0.00 3.704±1.44 3.035±0.79 3.437±1.36 3.037±0.19 3.393±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002WC CIL_0002WC_0002 CGP 1:23743155-23788232

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0005615 IDA extracellular space
GO:0005634 IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006357 TAS regulation of transcription from RNA polymerase II promoter
GO:0006366 TAS transcription from RNA polymerase II promoter
GO:0006368 TAS transcription elongation from RNA polymerase II promoter
GO:0010467 TAS gene expression
GO:0016021 IEA integral component of membrane
GO:0016032 TAS viral process
GO:0050434 TAS positive regulation of viral transcription

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030427 Tceb3-001 protein_coding Mus_musculus 0 2495

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