C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: myosin XIX
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000614623 MYO19-006 ENSG00000278259 9606 - 17:36495633-36534988 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeColonKidneyLiverLungOvaryPlacentaENST00000614623
Transcript ID Adipose Colon Kidney Liver Lung Ovary Placenta
ENST00000614623 3.581±0.00 2.206±0.00 11.015±0.00 3.891±0.00 2.228±1.76 6.669±2.06 2.336±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00085R CIL_00085R_0001 VISTA 17:36355391-36956100
CIL_0007YB CIL_0007YB_0001 VISTA 17:36401446-37002205
CIL_0007YB CIL_0007YB_0003 VISTA 17:36402232-37002285
CIL_0005HR CIL_0005HR_0002 CGP 17:36486629-36543435
CIL_0005HS CIL_0005HS_0002 CGP 17:36495633-36543435

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003774 IEA motor activity
GO:0003779 IEA actin binding
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005737 IDA cytoplasm
GO:0005741 IEA mitochondrial outer membrane
GO:0008152 IEA metabolic process
GO:0016459 IEA myosin complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000093969 Myo19-001 protein_coding Mus_musculus 0 2843
ENSMUST00000124152 Myo19-007 processed_transcript Mus_musculus 0 1873
ENSMUST00000141173 Myo19-002 processed_transcript Mus_musculus 0 1764
ENSMUST00000141705 Myo19-006 processed_transcript Mus_musculus 0 1260
ENSDART00000045539 myo5c-201 protein_coding Danio_rerio 0.00000000002 77
ENSDART00000153975 myo5c-001 protein_coding Danio_rerio 0.00000000002 77

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