C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: myosin VC
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000153975 myo5c-001 ENSDARG00000013782 7955 + 25:4799761-4845954 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartKidneyLiverENSDART00000153975
Transcript ID Heart Kidney Liver
ENSDART00000153975 0.072±0.05 0.568±0.23 0.076±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004YL CIL_0004YL_0001 CGP 25:4799761-4865580

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003774 IEA motor activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0016459 IEA myosin complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000258787 MYO1G-001 protein_coding Homo_sapiens 0.00000000000008 84
ENST00000397274 MYO9B-201 protein_coding Homo_sapiens 1e-24 121
ENST00000463516 MYO1G-004 retained_intron Homo_sapiens 0.0000000000001 84
ENST00000464434 MYO1G-002 nonsense_mediated_decay Homo_sapiens 0.00000000000006 84
ENST00000480503 MYO1G-005 retained_intron Homo_sapiens 0.0000000000001 84
ENST00000483585 MYO1G-003 retained_intron Homo_sapiens 0.00000000000009 84
ENST00000488554 MYO1G-006 retained_intron Homo_sapiens 0.0000000000001 84
ENST00000495831 MYO1G-007 nonsense_mediated_decay Homo_sapiens 0.00000000000007 84
ENST00000594824 MYO9B-002 protein_coding Homo_sapiens 1e-24 121
ENST00000595618 MYO9B-001 protein_coding Homo_sapiens 1e-24 121
ENST00000595641 MYO9B-003 protein_coding Homo_sapiens 1e-24 121
ENST00000610992 MYO19-003 nonsense_mediated_decay Homo_sapiens 0.00000000002 77
ENST00000611622 MYO19-008 retained_intron Homo_sapiens 0.00000000002 77
ENST00000612097 MYO19-018 nonsense_mediated_decay Homo_sapiens 0.000000000002 77
ENST00000614623 MYO19-006 protein_coding Homo_sapiens 0.00000000002 77
ENST00000615902 MYO19-020 nonsense_mediated_decay Homo_sapiens 0.000000000002 77
ENST00000618519 MYO19-202 protein_coding Homo_sapiens 0.00000000002 77
ENST00000621550 MYO19-002 nonsense_mediated_decay Homo_sapiens 0.00000000002 77

Loading