C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein 41, E3 ubiquitin protein ligase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000615206 RNF41-201 ENSG00000181852 9606 - 12:56202504-56221701 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000615206
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000615206 2.225±0.00 2.838±0.00 9.775±0.00 2.046±0.00 2.079±0.00 0.469±0.00 2.367±0.00 0.929±0.00 2.520±0.00 1.803±0.74 1.307±0.45 1.523±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000209 IDA protein polyubiquitination
GO:0004842 IEA:IDA ubiquitin-protein transferase activity
GO:0005515 IPI:IEA protein binding
GO:0005829 TAS cytosol
GO:0008270 IEA zinc ion binding
GO:0008285 IDA negative regulation of cell proliferation
GO:0010498 IDA proteasomal protein catabolic process
GO:0016567 IEA protein ubiquitination
GO:0016881 IEA acid-amino acid ligase activity
GO:0030336 IMP negative regulation of cell migration
GO:0031386 IEA protein tag
GO:0043408 IDA regulation of MAPK cascade
GO:0046872 IEA metal ion binding
GO:0051865 IDA protein autoubiquitination
GO:0051896 IDA regulation of protein kinase B signaling
GO:0097191 IDA extrinsic apoptotic signaling pathway
GO:2000377 IMP regulation of reactive oxygen species metabolic process
GO:2000379 IMP positive regulation of reactive oxygen species metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000096386 Rnf41-201 protein_coding Mus_musculus 0 1805
ENSMUST00000171342 Rnf41-202 protein_coding Mus_musculus 0 1602
ENSMUST00000122221 Gm4772-001 processed_pseudogene Mus_musculus 0 784
ENSMUST00000121507 Gm8761-001 processed_pseudogene Mus_musculus 0 765
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.000007 58

Loading