C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: damage-specific DNA binding protein 2, 48kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000616278 DDB2-004 ENSG00000134574 9606 + 11:47215137-47238849 nonsense_mediated_decay

Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000209 IDA protein polyubiquitination
GO:0000718 TAS nucleotide-excision repair, DNA damage removal
GO:0003677 TAS DNA binding
GO:0003684 IDA damaged DNA binding
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005515 IPI:IEA protein binding
GO:0005654 TAS nucleoplasm
GO:0006281 TAS DNA repair
GO:0006289 TAS nucleotide-excision repair
GO:0009411 IDA response to UV
GO:0031465 IDA Cul4B-RING E3 ubiquitin ligase complex
GO:0035518 IDA histone H2A monoubiquitination
GO:0043234 IDA protein complex
GO:0051865 IDA protein autoubiquitination
GO:0070914 IDA UV-damage excision repair

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000135927 Ddb2-005 processed_transcript Mus_musculus 0 453
ENSMUST00000028696 Ddb2-001 protein_coding Mus_musculus 0 387
ENSMUST00000111352 Ddb2-002 protein_coding Mus_musculus 0 387
ENSMUST00000152277 Ddb2-004 processed_transcript Mus_musculus 0 387
ENSMUST00000150427 Ddb2-003 processed_transcript Mus_musculus 0 244
ENSMUST00000002172 Acp2-001 protein_coding Mus_musculus 1e-37 161

Loading