C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: spondin 2, extracellular matrix protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000617421 SPON2-202 ENSG00000159674 9606 - 4:1166937-1208962 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartENST00000617421
Transcript ID Heart
ENST00000617421 0.132±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006LO CIL_0006LO_0001 CGP 4:1166932-1249953

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001530 IEA lipopolysaccharide binding
GO:0002448 IEA mast cell mediated immunity
GO:0003823 IEA antigen binding
GO:0005515 IEA protein binding
GO:0005578 IEA proteinaceous extracellular matrix
GO:0005615 IEA extracellular space
GO:0007155 IEA cell adhesion
GO:0007411 TAS axon guidance
GO:0008228 IEA opsonization
GO:0031012 IEA extracellular matrix
GO:0032496 IEA response to lipopolysaccharide
GO:0032755 IEA positive regulation of interleukin-6 production
GO:0032760 IEA positive regulation of tumor necrosis factor production
GO:0042742 IEA defense response to bacterium
GO:0043152 IEA induction of bacterial agglutination
GO:0045087 IEA innate immune response
GO:0046872 IEA metal ion binding
GO:0050832 IEA defense response to fungus
GO:0051607 IEA defense response to virus
GO:0060907 IEA positive regulation of macrophage cytokine production
GO:0070062 IDA extracellular vesicular exosome
GO:0071222 IEA cellular response to lipopolysaccharide

Homologs

No Homologs available.

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