C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger, HIT-type containing 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000617429 ZNHIT3-001 ENSG00000273611 9606 + 17:36486635-36495822 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000617429
Transcript ID Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000617429 14.984±5.50 6.962±0.00 10.859±0.00 5.521±4.08 3.513±0.00 5.618±2.29 8.509±0.00 9.814±0.00 20.447±9.56 12.547±1.91 18.027±1.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00085R CIL_00085R_0001 VISTA 17:36355391-36956100
CIL_0007YB CIL_0007YB_0001 VISTA 17:36401446-37002205
CIL_0007YB CIL_0007YB_0003 VISTA 17:36402232-37002285
CIL_0005HR CIL_0005HR_0002 CGP 17:36486629-36543435

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005622 NAS intracellular
GO:0006355 TAS regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding
GO:0046966 TAS thyroid hormone receptor binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000103195 Znhit3-001 protein_coding Mus_musculus 0 348
ENSMUST00000144552 Znhit3-003 processed_transcript Mus_musculus 0 278
ENSMUST00000136656 Znhit3-005 processed_transcript Mus_musculus 2e-40 171

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