C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cyclin A2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000618014 CCNA2-201 ENSG00000145386 9606 - 4:121816445-121823933 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLungOvaryPlacentaTestisENST00000618014
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Lung Ovary Placenta Testis
ENST00000618014 0.647±0.00 1.192±0.00 0.209±0.00 1.094±0.00 1.212±0.31 0.911±0.16 1.129±0.00 0.471±0.03 8.955±5.23 7.354±1.93 5.571±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000KG CIL_0000KG_0001 CGP 4:121801317-121823933
CIL_0000KF CIL_0000KF_0001 CGP 4:121816444-121870497

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000079 IEA regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0000086 TAS G2/M transition of mitotic cell cycle
GO:0000278 TAS mitotic cell cycle
GO:0005515 IPI protein binding
GO:0005634 IDA:IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0005737 IDA cytoplasm
GO:0007067 IEA mitotic nuclear division
GO:0007095 TAS mitotic G2 DNA damage checkpoint
GO:0007265 IEP Ras protein signal transduction
GO:0010389 IEA regulation of G2/M transition of mitotic cell cycle
GO:0019901 IEA protein kinase binding
GO:0051726 IEA regulation of cell cycle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000029270 Ccna2-001 protein_coding Mus_musculus 0 1397
ENSMUST00000147380 Ccna2-004 nonsense_mediated_decay Mus_musculus 0 1125
ENSMUST00000156575 Ccna2-003 processed_transcript Mus_musculus 0 327

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