C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: immunoglobulin heavy constant gamma 1 (G1m marker)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000618756 IGHG1-205 ENSG00000211896 9606 - 14:105668113-106538344 IG_C_gene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000618756
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000618756 10.485±0.00 6.573±0.00 26.132±0.00 8.834±0.00 10.953±0.00 19.111±0.00 8.383±0.00 0.295±0.00 46.652±0.00 1.797±0.53 3.774±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003823 TAS antigen binding
GO:0005515 IPI:IEA protein binding
GO:0005576 TAS extracellular region
GO:0005615 IDA extracellular space
GO:0006956 TAS complement activation
GO:0006958 TAS complement activation, classical pathway
GO:0038096 TAS Fc-gamma receptor signaling pathway involved in phagocytosis
GO:0045087 TAS innate immune response
GO:0070062 IDA extracellular vesicular exosome
GO:0072562 IDA blood microparticle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000103423 Ighg3-201 IG_C_gene Mus_musculus 0 412
ENSMUST00000103459 Ighv5-17-201 IG_LV_gene Mus_musculus 0 394
ENSMUST00000103446 Ighv5-6-201 IG_LV_gene Mus_musculus 0 311
ENSMUST00000103444 Ighv5-4-201 IG_LV_gene Mus_musculus 0 296
ENSMUST00000103442 Ighv5-2-201 IG_LV_gene Mus_musculus 0 198

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