C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: WAS protein family, member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000618852 WASF2-001 ENSG00000158195 9606 - 1:27404226-27490158 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000618852
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000618852 37.246±0.00 13.881±0.00 3.653±0.00 6.765±6.58 19.408±16.45 16.250±13.71 5.478±5.11 6.074±5.79 2.631±1.07 11.558±10.54 7.118±0.00 24.979±15.99 36.206±8.41 25.765±7.36

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008WN CIL_0008WN_0001 VISTA 1:27203963-27805666

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001525 IEA angiogenesis
GO:0001667 IEA ameboidal cell migration
GO:0001726 IEA ruffle
GO:0003779 IEA actin binding
GO:0005515 IPI protein binding
GO:0005622 IDA intracellular
GO:0005769 IEA early endosome
GO:0005829 TAS cytosol
GO:0005911 IEA cell-cell junction
GO:0006897 IEA endocytosis
GO:0006928 IEA cellular component movement
GO:0007188 TAS adenylate cyclase-modulating G-protein coupled receptor signaling pathway
GO:0010592 IMP positive regulation of lamellipodium assembly
GO:0015629 TAS actin cytoskeleton
GO:0016601 IEA Rac protein signal transduction
GO:0030027 IDA lamellipodium
GO:0030032 IEA lamellipodium assembly
GO:0030036 IEA actin cytoskeleton organization
GO:0030048 IEA actin filament-based movement
GO:0031209 IMP SCAR complex
GO:0032403 IDA protein complex binding
GO:0035855 IEA megakaryocyte development
GO:0038096 TAS Fc-gamma receptor signaling pathway involved in phagocytosis
GO:0045087 TAS innate immune response
GO:0051497 IMP negative regulation of stress fiber assembly
GO:0070062 IDA extracellular vesicular exosome
GO:0072673 IEA lamellipodium morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000084241 Wasf2-001 protein_coding Mus_musculus 0 1949
ENSMUST00000105912 Wasf2-002 protein_coding Mus_musculus 0 1829
ENSMUST00000138831 Wasf2-003 protein_coding Mus_musculus 0 512
ENSMUST00000136637 Wasf2-006 processed_transcript Mus_musculus 0 394
ENSMUST00000123578 Wasf2-005 processed_transcript Mus_musculus 0 261
ENSMUST00000136132 Wasf2-004 processed_transcript Mus_musculus 8.00001e-41 174

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