C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAB9A, member RAS oncogene family
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000618931 RAB9A-201 ENSG00000123595 9606 + X:13689121-13709823 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000618931
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000618931 4.650±0.00 1.713±0.00 2.830±0.55 3.764±0.87 2.270±0.00 0.627±0.00 2.639±0.42 1.059±0.00 3.881±0.00 2.128±0.00 4.912±0.95 3.862±0.08 1.659±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000P1 CIL_0000P1_0002 CGP X:13689121-13734635

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 IDA:IEA GTPase activity
GO:0005515 IPI protein binding
GO:0005525 IDA:IEA GTP binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005764 IDA lysosome
GO:0005770 IDA late endosome
GO:0005783 IEA endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0005886 IEA plasma membrane
GO:0006184 IDA:IEA GTP catabolic process
GO:0006886 IEA intracellular protein transport
GO:0006913 IEA nucleocytoplasmic transport
GO:0007165 IEA signal transduction
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0019003 IDA GDP binding
GO:0045335 IDA phagocytic vesicle
GO:0045921 IMP positive regulation of exocytosis
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000112091 Rab9-001 protein_coding Mus_musculus 0 1018
ENSMUST00000119785 Rab9b-ps1-001 processed_pseudogene Mus_musculus 0 765
ENSMUST00000049435 Rab9-002 protein_coding Mus_musculus 0 745
ENSMUST00000149315 Rab9-003 protein_coding Mus_musculus 0 267

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