C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0000P1_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000045027-ENSDARG00000068831 CGP 7955 9:56684564-56718790
GeneTranscriptPositionBiotype
ENSDARG00000045027 (rab9a)
RAB9A, member RAS oncogene family
ENSDART00000066198 (rab9a-001) 56684564-56702376 protein_coding
ENSDARG00000068831 (egfl6)
EGF-like-domain, multiple 6
ENSDART00000099693 (egfl6-202) 56709490-56718790 protein_coding
ENSDART00000148812 (egfl6-001) 56709489-56709841 protein_coding
ENSDARG00000097660 (trappc2)
trafficking protein particle complex 2
ENSDART00000150082 (trappc2-001) 56717697-56719061 protein_coding
CIL_0000P1_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000123595-ENSG00000196459 CGP 9606 X:13689121-13734635
GeneTranscriptPositionBiotype
ENSG00000123595 (RAB9A)
RAB9A, member RAS oncogene family
ENST00000243325 (RAB9A-002) 13689186-13709354 processed_transcript
ENST00000464506 (RAB9A-001) 13689125-13710506 protein_coding
ENST00000618931 (RAB9A-201) 13689121-13709823 protein_coding
ENSG00000196459 (TRAPPC2)
trafficking protein particle complex 2
ENST00000359680 (TRAPPC2-201) 13712244-13734635 protein_coding
ENST00000380578 (TRAPPC2-001) 13715497-13722240 retained_intron
ENST00000380579 (TRAPPC2-002) 13712247-13734556 protein_coding
ENST00000458511 (TRAPPC2-005) 13714358-13734575 protein_coding
ENST00000517553 (TRAPPC2-007) 13715800-13716718 retained_intron
ENST00000518847 (TRAPPC2-008) 13716550-13734633 protein_coding
ENST00000519382 (TRAPPC2-004) 13715537-13734545 retained_intron
ENST00000519885 (TRAPPC2-006) 13715837-13734575 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000P1_0001ENSDARG00000045027ENSDART00000066198ENSDARG00000068831ENSDART00000099693ENSDART00000148812ENSDARG00000097660ENSDART00000150082CIL_0000P1_0002ENSG00000123595ENST00000243325ENST00000464506ENST00000618931ENSG00000196459ENST00000359680ENST00000380578ENST00000380579ENST00000458511ENST00000517553ENST00000518847ENST00000519382ENST00000519885
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000P1_0001ENSDARG00000045027ENSDART00000066198ENSDARG00000068831ENSDART00000099693ENSDART00000148812ENSDARG00000097660ENSDART00000150082CIL_0000P1_0002ENSG00000123595ENST00000243325ENST00000464506ENST00000618931ENSG00000196459ENST00000359680ENST00000380578ENST00000380579ENST00000518847ENST00000519382ENST00000519885
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000045027 ENSDART00000066198 N/A N/A N/A 5.291±3.61 N/A N/A 1.794±0.69 N/A 0.568±0.00 N/A 2.390±0.00 N/A N/A N/A
ENSDARG00000068831 ENSDART00000099693 N/A N/A N/A 9.789±7.06 N/A N/A 4.255±3.75 2.237±1.23 1.774±0.00 N/A 5.948±0.00 N/A N/A N/A
ENSDART00000148812 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 32.189±0.00 N/A N/A N/A
ENSDARG00000097660 ENSDART00000150082 N/A N/A N/A 27.805±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000123595 ENST00000243325 N/A 3.912±0.00 N/A 5.067±0.00 8.349±0.00 5.230±0.00 2.614±1.60 1.129±0.00 3.642±0.00 6.395±0.00 2.740±0.00 10.904±0.00 14.281±0.00 3.194±0.14
ENST00000464506 0.678±0.00 0.539±0.00 0.595±0.00 1.455±0.00 N/A 0.947±0.00 0.736±0.23 1.160±0.00 1.956±0.00 1.682±0.00 1.193±0.84 1.436±0.15 1.792±0.78 0.419±0.00
ENST00000618931 N/A 4.650±0.00 1.713±0.00 2.830±0.55 3.764±0.87 2.270±0.00 0.627±0.00 2.639±0.42 1.059±0.00 3.881±0.00 2.128±0.00 4.912±0.95 3.862±0.08 1.659±0.00
ENSG00000196459 ENST00000359680 2.276±0.00 2.066±0.00 N/A 2.787±1.09 2.505±0.51 1.598±0.76 0.692±0.34 2.955±0.00 1.760±0.42 1.394±0.00 1.062±0.00 2.533±0.57 1.338±0.19 1.707±1.19
ENST00000380578 N/A N/A 0.190±0.00 N/A 0.484±0.00 0.345±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000380579 N/A N/A 0.841±0.00 1.281±0.16 N/A N/A N/A 0.969±0.00 1.819±0.00 0.883±0.00 0.218±0.00 1.478±0.27 0.583±0.00 N/A
ENST00000458511 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000517553 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518847 N/A N/A N/A N/A N/A N/A 0.669±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000519382 N/A N/A N/A N/A 0.989±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519885 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.978±0.00 N/A N/A 1.639±0.00

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