C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 778
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000620195 ZNF778-001 ENSG00000170100 9606 + 16:89217710-89237071 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartKidneyLiverOvaryPlacentaTestisENST00000620195
Transcript ID Brain Breast Colon Heart Kidney Liver Ovary Placenta Testis
ENST00000620195 0.362±0.06 0.280±0.19 0.215±0.00 0.103±0.00 0.232±0.00 0.226±0.02 0.663±0.00 0.260±0.00 0.680±0.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00091T CIL_00091T_0001 VISTA 16:88690989-89294615
CIL_0008HA CIL_0008HA_0001 VISTA 16:89018329-89621235

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000057652 Zfp420-001 protein_coding Mus_musculus 0.00000000000002 88
ENSMUST00000145952 Zfp420-003 processed_transcript Mus_musculus 0.00000000000002 88
ENSMUST00000074876 Zfp420-002 protein_coding Mus_musculus 0.00000000000002 88
ENSMUST00000073201 Zfp958-201 protein_coding Mus_musculus 0.00000000000002 88
ENSMUST00000098550 Zfp791-201 protein_coding Mus_musculus 0.00000000000007 86
ENSMUST00000109997 Zfp961-201 protein_coding Mus_musculus 0.0000000000003 84
ENSMUST00000138304 Zfp961-004 processed_transcript Mus_musculus 0.0000000000003 84
ENSMUST00000131237 Zfp961-001 protein_coding Mus_musculus 0.0000000000003 84
ENSMUST00000105314 AU041133-201 protein_coding Mus_musculus 0.0000000006 73
ENSMUST00000184117 2010315B03Rik-001 protein_coding Mus_musculus 0.000000007 69
ENSMUST00000177714 2010315B03Rik-001 protein_coding Mus_musculus 0.000000007 69
ENSMUST00000167955 Zfp60-201 protein_coding Mus_musculus 0.00000009 66
ENSMUST00000042641 Zfp60-002 protein_coding Mus_musculus 0.00000009 66
ENSMUST00000136373 Zfp60-006 nonsense_mediated_decay Mus_musculus 0.00000009 66
ENSMUST00000108336 Zfp60-001 protein_coding Mus_musculus 0.00000009 66
ENSMUST00000085664 Zfp433-201 protein_coding Mus_musculus 0.00000009 66
ENSMUST00000184310 2010315B03Rik-003 protein_coding Mus_musculus 0.000001 62
ENSMUST00000071300 2010315B03Rik-003 protein_coding Mus_musculus 0.000001 62
ENSMUST00000165906 Gm4924-201 protein_coding Mus_musculus 0.00002 58
ENSMUST00000108015 Zfp619-001 protein_coding Mus_musculus 0.00006 57
ENSMUST00000086281 Zfp599-001 protein_coding Mus_musculus 0.0002 55
ENSMUST00000146544 Golga2-011 processed_transcript Mus_musculus 0.0007 53

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