C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: jumonji domain containing 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000620518 JMJD4-006 ENSG00000081692 9606 - 1:227731224-227735283 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000620518
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000620518 3.623±0.00 7.595±0.00 4.228±0.00 3.953±0.00 2.462±0.00 5.626±0.00 5.214±0.00 3.876±0.00 3.575±0.00 6.038±0.22 6.976±1.65 10.518±1.83

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000C4 CIL_0000C4_0002 CGP 1:227728539-227781231

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000108777 Jmjd4-001 protein_coding Mus_musculus 0 813
ENSMUST00000126158 Jmjd4-004 retained_intron Mus_musculus 0 435
ENSMUST00000045279 Jmjd4-002 protein_coding Mus_musculus 0 435
ENSMUST00000147163 Jmjd4-003 nonsense_mediated_decay Mus_musculus 0 398

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