C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: scavenger receptor class F, member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000622235 SCARF2-002 ENSG00000244486 9606 - 22:20424815-20437825 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonLungOvaryPlacentaTestisENST00000622235
Transcript ID Colon Lung Ovary Placenta Testis
ENST00000622235 1.921±0.00 3.325±0.00 7.314±4.94 7.169±3.58 3.786±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00086B CIL_00086B_0001 VISTA 22:20120771-20724717

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005044 IEA scavenger receptor activity
GO:0005515 IPI:IEA protein binding
GO:0005925 IDA focal adhesion
GO:0006898 IEA receptor-mediated endocytosis
GO:0007155 IEA cell adhesion
GO:0007157 IEA heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000012161 Scarf2-201 protein_coding Mus_musculus 0 2202

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