C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger and SCAN domain containing 26
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000623276 ZSCAN26-005 ENSG00000197062 9606 + 6:28267153-28277530 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLiverLungOvaryPlacentaTestisENST00000623276
Transcript ID Adipose Adrenal Brain Breast Colon Heart Liver Lung Ovary Placenta Testis
ENST00000623276 1.263±0.00 3.282±0.00 1.706±0.00 2.075±0.00 2.108±0.00 1.945±0.00 0.330±0.00 0.564±0.00 1.388±0.77 0.677±0.02 1.811±0.02

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003700 NAS:IEA sequence-specific DNA binding transcription factor activity
GO:0005634 NAS:IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 NAS:IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000117721 Zkscan3-004 protein_coding Mus_musculus 3e-35 154
ENSMUST00000070785 Zkscan3-003 protein_coding Mus_musculus 3e-35 154
ENSMUST00000116433 Zkscan3-002 protein_coding Mus_musculus 3e-35 154
ENSMUST00000116434 Zkscan3-001 protein_coding Mus_musculus 3e-35 154
ENSMUST00000062609 Zkscan4-001 protein_coding Mus_musculus 2e-33 148
ENSMUST00000099720 Zscan12-002 protein_coding Mus_musculus 2e-33 148
ENSMUST00000053293 Zscan12-001 protein_coding Mus_musculus 2e-33 148
ENSMUST00000076238 Gm10065-201 protein_coding Mus_musculus 2e-28 132
ENSMUST00000161896 Zkscan5-003 nonsense_mediated_decay Mus_musculus 3e-26 124
ENSMUST00000031601 Zkscan5-002 protein_coding Mus_musculus 3e-26 124
ENSMUST00000085671 Zkscan5-001 protein_coding Mus_musculus 3e-26 124
ENSMUST00000110481 Zkscan8-002 protein_coding Mus_musculus 5e-19 100
ENSMUST00000156674 Zkscan8-003 protein_coding Mus_musculus 5e-19 100
ENSMUST00000045228 Zkscan8-001 protein_coding Mus_musculus 5e-19 100
ENSMUST00000094116 Zscan25-201 protein_coding Mus_musculus 0.000000000000001 90

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