C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: phosphodiesterase 6A, cGMP-specific, rod, alpha
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000000380 pde6a 7955 - 14:26083459-26112198 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000000392 pde6a-001 26083459-26112198 protein_coding

Danio rerio EnsemblZv9

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Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000000392
Transcript ID Brain Heart Kidney Muscle
ENSDART00000000392 0.380±0.09 0.049±0.00 0.269±0.27 0.150±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001JR CIL_0001JR_0001 CGP 14:26013242-26112198

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004114 IEA 3',5'-cyclic-nucleotide phosphodiesterase activity
GO:0005515 IEA protein binding
GO:0007165 IEA signal transduction
GO:0008081 IEA phosphoric diester hydrolase activity
GO:0016787 IEA hydrolase activity
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000132915 PDE6A phosphodiesterase 6A, cGMP-specific, rod, alpha protein_coding Homo_sapiens
ENSMUSG00000024575 Pde6a phosphodiesterase 6A, cGMP-specific, rod, alpha protein_coding Mus_musculus

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