C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: UPF3 regulator of nonsense transcripts homolog B (yeast)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000000489 upf3b 7955 - 14:34314308-34326116 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000010019 upf3b-001 34314308-34326116 protein_coding
  ENSDART00000133248 upf3b-002 34315124-34319959 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000010019
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000010019 10.604±4.86 13.984±8.95 9.535±11.64 0.528±0.00 3.984±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000175 CIL_000175_0001 CGP 14:34306764-34326116

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000125351 UPF3B UPF3 regulator of nonsense transcripts homolog B (yeast) protein_coding Homo_sapiens
ENSMUSG00000036572 Upf3b UPF3 regulator of nonsense transcripts homolog B (yeast) protein_coding Mus_musculus

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