C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 1 (glutamate/neutral amino acid transporter), member 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000000551 slc1a4 7955 - 13:24655104-24671375 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000043004 slc1a4-001 24655879-24671222 protein_coding
  ENSDART00000057584 slc1a4-201 24655104-24671222 protein_coding
  ENSDART00000127741 slc1a4-202 24655110-24671375 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000043004ENSDART00000057584ENSDART00000127741
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000043004 N/A N/A N/A 0.075±0.00 N/A
ENSDART00000057584 27.539±5.86 1.020±0.51 0.558±0.00 N/A 2.427±0.00
ENSDART00000127741 9.066±0.35 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004OM CIL_0004OM_0001 CGP 13:24639272-24671375
CIL_0004OP CIL_0004OP_0001 CGP 13:24655104-24748435

Gene Ontology
GO IDEvidence TypeGO Description
GO:0006835 IEA dicarboxylic acid transport
GO:0016020 IEA membrane
GO:0017153 IEA sodium:dicarboxylate symporter activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000115902 SLC1A4 solute carrier family 1 (glutamate/neutral amino acid transporter), member 4 protein_coding Homo_sapiens
ENSMUSG00000020142 Slc1a4 solute carrier family 1 (glutamate/neutral amino acid transporter), member 4 protein_coding Mus_musculus

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