C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: poly-U binding splicing factor b
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000001241 puf60b 7955 + 7:43876256-43887769 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000038487 puf60b-001 43876256-43887769 protein_coding
  ENSDART00000052274 puf60b-201 43876308-43887768 protein_coding
  ENSDART00000143285 puf60b-002 43876256-43887769 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000038487ENSDART00000052274ENSDART00000143285
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000038487 18.304±9.04 12.692±0.00 14.312±0.00 N/A N/A
ENSDART00000052274 24.954±3.39 28.653±10.20 39.024±21.89 3.694±0.00 10.460±0.00
ENSDART00000143285 N/A N/A 15.487±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0003723 IEA RNA binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0006397 IEA mRNA processing
GO:0006915 IEA apoptotic process
GO:0008380 IEA RNA splicing
GO:0030529 IEA ribonucleoprotein complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000179950 PUF60 poly-U binding splicing factor 60KDa protein_coding Homo_sapiens
ENSMUSG00000002524 Puf60 poly-U binding splicing factor 60 protein_coding Mus_musculus

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