C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nucleolin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000002710 ncl 7955 - 22:39555553-39572992 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000017188 ncl-201 39555946-39572942 protein_coding
  ENSDART00000124698 ncl-001 39555553-39572992 protein_coding
  ENSDART00000125916 ncl-202 39556523-39572858 protein_coding
  ENSDART00000130171 ncl-002 39555940-39572932 nonsense_mediated_decay
  ENSDART00000141088 ncl-004 39557910-39558724 retained_intron
  ENSDART00000147402 ncl-003 39557003-39564675 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000017188ENSDART00000124698ENSDART00000125916ENSDART00000130171
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000017188 31.373±21.25 132.637±86.09 192.344±57.24 23.087±0.00 27.722±0.00
ENSDART00000124698 24.352±3.05 21.155±2.91 37.386±0.00 12.455±0.00 6.902±0.00
ENSDART00000125916 24.462±0.00 15.538±0.00 38.463±0.00 11.807±0.00 N/A
ENSDART00000130171 4.793±0.68 N/A 31.941±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004KZ CIL_0004KZ_0001 CGP 22:39538921-39572992

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000115053 NCL nucleolin protein_coding Homo_sapiens
ENSMUSG00000026234 Ncl nucleolin protein_coding Mus_musculus

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