C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: collagen, type IV, alpha 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000002831 col4a4 7955 - 15:35219728-35323241 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000061186 col4a4-201 35220525-35321417 protein_coding
  ENSDART00000154476 col4a4-001 35219728-35323241 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000061186ENSDART00000154476
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000061186 0.132±0.04 0.200±0.10 0.703±0.03 0.058±0.00 N/A
ENSDART00000154476 0.042±0.02 N/A 0.100±0.00 N/A 0.046±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004AH CIL_0004AH_0001 CGP 15:35200934-35323241
CIL_0004AI CIL_0004AI_0001 CGP 15:35219728-35380634

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005201 IEA extracellular matrix structural constituent
GO:0005581 IEA collagen

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000081052 COL4A4 collagen, type IV, alpha 4 protein_coding Homo_sapiens
ENSMUSG00000067158 Col4a4 collagen, type IV, alpha 4 protein_coding Mus_musculus

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