C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: syntaxin 16
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000003307 stx16 7955 + 6:49674636-49692416 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000002693 stx16-201 49674955-49688896 protein_coding
  ENSDART00000154738 stx16-001 49674637-49692416 protein_coding
  ENSDART00000155934 stx16-002 49674636-49681373 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverENSDART00000002693ENSDART00000154738
Transcript ID Brain Heart Kidney Liver
ENSDART00000002693 N/A N/A N/A 0.172±0.00
ENSDART00000154738 8.237±2.75 1.997±1.75 2.696±1.19 0.376±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000697 CIL_000697_0001 CGP 6:49602542-49692416
CIL_000696 CIL_000696_0001 CGP 6:49674636-49712542

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005484 IEA SNAP receptor activity
GO:0005515 IEA protein binding
GO:0006886 IEA intracellular protein transport
GO:0016020 IEA membrane
GO:0016192 IEA vesicle-mediated transport
GO:0039023 IMP pronephric duct morphogenesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000124222 STX16 syntaxin 16 protein_coding Homo_sapiens
ENSG00000254995 STX16-NPEPL1 STX16-NPEPL1 readthrough (NMD candidate) protein_coding Homo_sapiens
ENSMUSG00000027522 Stx16 syntaxin 16 protein_coding Mus_musculus

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