C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: syntaxin 16
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000027522 Stx16 10090 + 2:174076308-174099771 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000044638 Stx16-201 174077058-174099770 protein_coding
  ENSMUST00000087908 Stx16-001 174076922-174099771 protein_coding
  ENSMUST00000134876 Stx16-002 174076318-174090734 protein_coding
  ENSMUST00000147038 Stx16-003 174076322-174093526 protein_coding
  ENSMUST00000155000 Stx16-004 174076308-174092433 protein_coding
  ENSMUST00000156054 Stx16-005 174077066-174096967 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000044638ENSMUST00000087908ENSMUST00000147038ENSMUST00000156054
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000044638 N/A N/A 5.921±0.00 13.548±0.00 3.327±0.99 3.583±0.00 N/A N/A 4.781±1.62 5.842±0.00 2.054±0.56 15.042±0.00 7.065±3.76 N/A
ENSMUST00000087908 9.372±5.31 9.672±2.52 10.443±4.73 17.807±1.07 9.122±2.52 3.832±1.63 4.752±1.24 6.201±3.07 3.646±1.37 5.345±2.02 1.393±0.35 9.741±4.25 6.143±2.60 4.655±1.72
ENSMUST00000147038 N/A 11.311±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.466±3.09 N/A N/A
ENSMUST00000156054 N/A 8.007±0.00 N/A N/A N/A N/A N/A 7.332±0.00 N/A 9.279±0.00 N/A 9.466±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000696 CIL_000696_0003 CGP 2:174076308-174123070

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005484 IEA SNAP receptor activity
GO:0005515 IPI protein binding
GO:0005794 IDA Golgi apparatus
GO:0006886 IEA intracellular protein transport
GO:0006891 IEA intra-Golgi vesicle-mediated transport
GO:0016021 IEA integral component of membrane
GO:0031201 IEA SNARE complex
GO:0042147 ISS retrograde transport, endosome to Golgi

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000003307 stx16 syntaxin 16 protein_coding Danio_rerio
ENSG00000124222 STX16 syntaxin 16 protein_coding Homo_sapiens
ENSG00000254995 STX16-NPEPL1 STX16-NPEPL1 readthrough (NMD candidate) protein_coding Homo_sapiens

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