C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Gene Info | |||||
|---|---|---|---|---|---|
| Description: | STX16-NPEPL1 readthrough (NMD candidate) | ||||
| Gene Accession | Gene Name | Tax ID | Strand | Position | Gene Biotype |
ENSG00000254995  |
STX16-NPEPL1 | 9606 | + |
20:58651434-58715410  |
protein_coding |
| Transcript Accession | Transcript Name | Position | Transcript Biotype | ||
| ENST00000413559 |
STX16-NPEPL1-002 | 58673638-58692206 | retained_intron | ||
| ENST00000530122 |
STX16-NPEPL1-001 | 58651434-58715410 | nonsense_mediated_decay | ||
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_000697 | CIL_000697_0002 | CGP | 20:58459101-58679526 |
| CIL_000696 | CIL_000696_0002 | CGP | 20:58651434-58719238 |
Gene Ontology |
||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005484 | IEA | SNAP receptor activity |
| GO:0005515 | IEA | protein binding |
| GO:0005730 | IDA | nucleolus |
| GO:0006886 | IEA | intracellular protein transport |
| GO:0006891 | IEA | intra-Golgi vesicle-mediated transport |
| GO:0016020 | IEA | membrane |
| GO:0016192 | IEA | vesicle-mediated transport |
| GO:0031201 | IEA | SNARE complex |
| GO:0043231 | IDA | intracellular membrane-bounded organelle |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Description | Biotype | Species | |
|
ENSDARG00000003307
|
stx16 | syntaxin 16 | protein_coding | Danio_rerio | |
|
ENSMUSG00000027522
|
Stx16 | syntaxin 16 | protein_coding | Mus_musculus | |
