C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: microphthalmia-associated transcription factor a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000003732 mitfa 7955 + 6:43321687-43364577 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000056457 mitfa-001 43357899-43364577 protein_coding
  ENSDART00000122793 mitfa-003 43321687-43359037 protein_coding
  ENSDART00000143374 mitfa-002 43331359-43364577 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000056457ENSDART00000122793
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000056457 0.066±0.03 0.211±0.00 1.189±0.93 N/A 0.243±0.00
ENSDART00000122793 0.211±0.00 N/A N/A 0.065±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001TC CIL_0001TC_0001 CGP 6:43182265-43364577

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000981 IDA sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0005654 IC nucleoplasm
GO:0006351 IDA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0006357 IDA regulation of transcription from RNA polymerase II promoter
GO:0006366 IDA transcription from RNA polymerase II promoter
GO:0030318 IMP melanocyte differentiation
GO:0046983 IEA protein dimerization activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000187098 MITF microphthalmia-associated transcription factor protein_coding Homo_sapiens
ENSMUSG00000035158 Mitf microphthalmia-associated transcription factor protein_coding Mus_musculus

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