C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: choroideremia (Rab escort protein 1)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000003845 chm 7955 + 21:33652581-33759726 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000005479 chm-001 33652581-33759726 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000005479
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000005479 9.991±3.46 8.059±4.18 10.687±3.29 0.485±0.00 3.415±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007KY CIL_0007KY_0005 UCNEbase 21:33341197-33747601

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004663 IEA Rab geranylgeranyltransferase activity
GO:0005968 IEA Rab-protein geranylgeranyltransferase complex
GO:0006886 IEA intracellular protein transport
GO:0042491 IMP auditory receptor cell differentiation
GO:0048798 IMP swim bladder inflation
GO:0050910 IMP detection of mechanical stimulus involved in sensory perception of sound
GO:0050935 IMP iridophore differentiation
GO:0060042 IMP retina morphogenesis in camera-type eye

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000188419 CHM choroideremia (Rab escort protein 1) protein_coding Homo_sapiens
ENSG00000203668 CHML choroideremia-like (Rab escort protein 2) protein_coding Homo_sapiens
ENSMUSG00000025531 Chm choroidermia protein_coding Mus_musculus
ENSMUSG00000078185 Chml choroideremia-like protein_coding Mus_musculus

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