C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: CCR4-NOT transcription complex, subunit 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000004174 cnot1 7955 + 25:17670327-17703688 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000017536 cnot1-201 17670327-17703687 protein_coding
  ENSDART00000125459 cnot1-001 17670327-17703688 protein_coding
  ENSDART00000141311 cnot1-002 17696573-17697967 protein_coding
  ENSDART00000144339 cnot1-003 17699579-17700832 retained_intron
  ENSDART00000148321 cnot1-004 17702182-17703184 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000017536ENSDART00000125459
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000017536 N/A 0.708±0.00 2.664±0.00 N/A N/A
ENSDART00000125459 21.858±6.14 8.007±5.90 9.631±0.00 4.240±0.00 8.105±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005488 IEA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000125107 CNOT1 CCR4-NOT transcription complex, subunit 1 protein_coding Homo_sapiens
ENSMUSG00000036550 Cnot1 CCR4-NOT transcription complex, subunit 1 protein_coding Mus_musculus

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