C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CCR4-NOT transcription complex, subunit 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000125459 cnot1-001 ENSDARG00000004174 7955 + 25:17670327-17703688 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000125459
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000125459 21.858±6.14 8.007±5.90 9.631±0.00 4.240±0.00 8.105±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005488 IEA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000068452 Cnot1-201 protein_coding Mus_musculus 0 4423
ENSMUST00000098473 Cnot1-202 protein_coding Mus_musculus 0 2940
ENST00000317147 CNOT1-001 protein_coding Homo_sapiens 0 3029
ENST00000441024 CNOT1-002 protein_coding Homo_sapiens 0 1722
ENST00000564557 CNOT1-010 protein_coding Homo_sapiens 0 409
ENST00000565605 CNOT1-020 nonsense_mediated_decay Homo_sapiens 0 484
ENST00000565697 CNOT1-007 protein_coding Homo_sapiens 0 250
ENST00000567188 CNOT1-005 nonsense_mediated_decay Homo_sapiens 0 2460
ENST00000567285 CNOT1-016 protein_coding Homo_sapiens 0 315
ENST00000568158 CNOT1-009 processed_transcript Homo_sapiens 0.00000005 62
ENST00000569020 CNOT1-008 protein_coding Homo_sapiens 0 250
ENST00000569240 CNOT1-003 protein_coding Homo_sapiens 0 3046
ENST00000569916 CNOT1-011 retained_intron Homo_sapiens 0 289

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