C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: TAR DNA binding protein, like
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000004452 tardbpl 7955 + 23:29600682-29605737 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000027255 tardbpl-002 29600844-29605425 nonsense_mediated_decay
  ENSDART00000126681 tardbpl-001 29600682-29605737 nonsense_mediated_decay
  ENSDART00000139223 tardbpl-003 29600682-29603757 protein_coding
  ENSDART00000141928 tardbpl-004 29600682-29604510 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000027255ENSDART00000126681ENSDART00000139223ENSDART00000141928
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000027255 15.553±0.00 16.507±1.17 8.463±0.00 5.514±0.00 4.975±0.00
ENSDART00000126681 31.423±10.35 12.457±2.39 14.743±6.55 N/A 9.392±0.00
ENSDART00000139223 14.398±0.00 8.082±0.00 N/A 3.974±0.00 4.362±0.00
ENSDART00000141928 16.946±0.00 N/A N/A N/A 5.533±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00019T CIL_00019T_0001 CGP 23:29576743-29605737

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0007409 IGI axonogenesis
GO:0007626 IGI locomotory behavior

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000120948 TARDBP TAR DNA binding protein protein_coding Homo_sapiens
ENSMUSG00000041459 Tardbp TAR DNA binding protein protein_coding Mus_musculus

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