C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protein tyrosine phosphatase, receptor type, f, b
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000005754 ptprfb 7955 - 2:17349918-17718646 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000083314 ptprfb-001 17349918-17599781 protein_coding
  ENSDART00000133709 ptprfb-002 17431830-17466006 protein_coding
  ENSDART00000155124 ptprfb-003 17563670-17718646 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartLiverMuscleENSDART00000083314
Transcript ID Heart Liver Muscle
ENSDART00000083314 0.547±0.15 1.712±0.00 1.315±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004721 IEA phosphoprotein phosphatase activity
GO:0004725 IEA protein tyrosine phosphatase activity
GO:0005515 IEA protein binding
GO:0006470 IEA protein dephosphorylation
GO:0007155 IEA cell adhesion
GO:0008201 IEA heparin binding
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0016311 IEA dephosphorylation
GO:0016787 IEA hydrolase activity
GO:0016791 IEA phosphatase activity
GO:0097374 IMP sensory neuron axon guidance

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000142949 PTPRF protein tyrosine phosphatase, receptor type, F protein_coding Homo_sapiens
ENSMUSG00000033295 Ptprf protein tyrosine phosphatase, receptor type, F protein_coding Mus_musculus

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