C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein tyrosine phosphatase, receptor type, f, b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000083314 ptprfb-001 ENSDARG00000005754 7955 - 2:17349918-17599781 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartLiverMuscleENSDART00000083314
Transcript ID Heart Liver Muscle
ENSDART00000083314 0.547±0.15 1.712±0.00 1.315±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004721 IEA phosphoprotein phosphatase activity
GO:0004725 IEA protein tyrosine phosphatase activity
GO:0005515 IEA protein binding
GO:0006470 IEA protein dephosphorylation
GO:0007155 IEA cell adhesion
GO:0008201 IEA heparin binding
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0016311 IEA dephosphorylation
GO:0016787 IEA hydrolase activity
GO:0016791 IEA phosphatase activity
GO:0097374 IMP sensory neuron axon guidance

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000049074 Ptprf-001 protein_coding Mus_musculus 0 1496
ENSMUST00000123484 Ptprf-004 processed_transcript Mus_musculus 0 974
ENSMUST00000124758 Ptprf-003 protein_coding Mus_musculus 0 1428
ENSMUST00000150096 Ptprf-002 protein_coding Mus_musculus 0 1428
ENST00000359947 PTPRF-001 protein_coding Homo_sapiens 0 1539
ENST00000372407 PTPRF-005 protein_coding Homo_sapiens 0 1448
ENST00000412568 PTPRF-014 protein_coding Homo_sapiens 0 1448
ENST00000414879 PTPRF-006 protein_coding Homo_sapiens 0 1448
ENST00000429895 PTPRF-015 protein_coding Homo_sapiens 0 1539
ENST00000438120 PTPRF-002 protein_coding Homo_sapiens 0 1539
ENST00000477970 PTPRF-007 processed_transcript Homo_sapiens 0 1003
ENST00000496447 PTPRF-008 processed_transcript Homo_sapiens 0 1539

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