C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ribosomal protein L23a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000006316 rpl23a 7955 + 21:25465361-25468127 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000003001 rpl23a-001 25465361-25468127 protein_coding
  ENSDART00000134939 rpl23a-003 25465400-25467653 retained_intron
  ENSDART00000141001 rpl23a-002 25465448-25468125 processed_transcript
  ENSDART00000146573 rpl23a-004 25465421-25468125 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000003001ENSDART00000134939ENSDART00000146573
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000003001 267.180±2.89 1088.673±325.67 503.311±697.67 674.812±0.00 758.524±0.00
ENSDART00000134939 N/A 0.635±0.00 0.638±0.00 N/A N/A
ENSDART00000146573 44.455±0.00 0.433±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000DE CIL_0000DE_0001 CGP 21:25455939-25468127
CIL_0004ZJ CIL_0004ZJ_0001 CGP 21:25465361-25483451

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003735 IEA structural constituent of ribosome
GO:0005622 IEA intracellular
GO:0005840 IEA ribosome
GO:0006412 IEA translation
GO:0030529 IEA ribonucleoprotein complex
GO:0031016 IMP pancreas development
GO:0051726 IMP regulation of cell cycle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000198242 RPL23A ribosomal protein L23a protein_coding Homo_sapiens
ENSMUSG00000058546 Rpl23a ribosomal protein L23A protein_coding Mus_musculus
ENSMUSG00000078126 Rpl23a-ps3 ribosomal protein L23A, pseudogene 3 protein_coding Mus_musculus
ENSMUSG00000078380 Gm6096 predicted gene 6096 protein_coding Mus_musculus
ENSMUSG00000094277 Gm21726 predicted gene, 21726 protein_coding Mus_musculus

Loading