C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nuclear receptor subfamily 1, group D, member 2b
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000009594 nr1d2b 7955 + 19:19388563-19395415 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000104466 nr1d2b-003 19391538-19392400 retained_intron
  ENSDART00000124597 nr1d2b-002 19388563-19392195 nonsense_mediated_decay
  ENSDART00000127353 nr1d2b-001 19388583-19395415 protein_coding
  ENSDART00000151082 nr1d2b-004 19390292-19392399 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000127353
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000127353 44.072±12.92 27.968±14.25 21.179±6.78 1.392±0.00 4.290±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002VH CIL_0002VH_0001 CGP 19:19373861-19395415
CIL_00025B CIL_00025B_0001 CGP 19:19388563-19646473

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0003707 IEA steroid hormone receptor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0008270 IEA zinc ion binding
GO:0043401 IEA steroid hormone mediated signaling pathway
GO:0043565 IEA sequence-specific DNA binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000174738 NR1D2 nuclear receptor subfamily 1, group D, member 2 protein_coding Homo_sapiens
ENSMUSG00000021775 Nr1d2 nuclear receptor subfamily 1, group D, member 2 protein_coding Mus_musculus

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